###README####

Author: Arturo Vera
	Last update March 2022

This folder has the genomes from the Salmon salar microbial genome altas (SMGA) v. 1.0


-The folders: 
	- Culturomics has all the genomes (fasta files and gff) from the bacterial isolates of Salmon gut.
	- MAGs has all the metagenome assembled genomes (fasta files and gff) from the metagenomic surveys of Salmon digesta of different
	fish.

Also both folders have a *.tsv file with the main statistics and taxonomy calssification of each genome.


Genome annotation were performed by DRAM using all the databases availables.

Complete annotation files as .gbk file of each genome can be found in the genBank folder.

Prdicted genes as .ffn files in the PredictedGenesffn.dir folder.

Translated protein and annotation in the PredictedProteinsfaa.dir folder.


The SMGA_v1.annotations.tsv file is a table with the complete annotation produced by DRAM and GTBDBTK pipelines for all the genomes in the atlas.